Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ55913.1 | dnaN | CLOTH_10910 | CLOTH_15210 | Hypothetical protein; SNF2 family N-terminal domain. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.941 |
| OPJ55913.1 | rebO | CLOTH_10910 | CLOTH_14470 | Hypothetical protein; SNF2 family N-terminal domain. | Flavin-dependent L-tryptophan oxidase RebO precursor. | 0.909 |
| OPJ56036.1 | adhE | CLOTH_12140 | CLOTH_11210 | Blue-light-activated protein. | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.734 |
| OPJ56036.1 | dnaN | CLOTH_12140 | CLOTH_15210 | Blue-light-activated protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.678 |
| OPJ56036.1 | glnK | CLOTH_12140 | CLOTH_07780 | Blue-light-activated protein. | Sensor histidine kinase GlnK. | 0.906 |
| OPJ56036.1 | kinA | CLOTH_12140 | CLOTH_17360 | Blue-light-activated protein. | Sporulation kinase A. | 0.894 |
| OPJ56036.1 | rebO | CLOTH_12140 | CLOTH_14470 | Blue-light-activated protein. | Flavin-dependent L-tryptophan oxidase RebO precursor. | 0.627 |
| OPJ56189.1 | dnaN | CLOTH_05930 | CLOTH_15210 | Hypothetical protein; SNF2 family N-terminal domain. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.941 |
| OPJ56189.1 | rebO | CLOTH_05930 | CLOTH_14470 | Hypothetical protein; SNF2 family N-terminal domain. | Flavin-dependent L-tryptophan oxidase RebO precursor. | 0.909 |
| adhE | OPJ56036.1 | CLOTH_11210 | CLOTH_12140 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Blue-light-activated protein. | 0.734 |
| adhE | gloA_1 | CLOTH_11210 | CLOTH_06660 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Lactoylglutathione lyase. | 0.778 |
| adhE | mdh | CLOTH_11210 | CLOTH_06800 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | NAD-dependent methanol dehydrogenase. | 0.730 |
| adhE | puuB | CLOTH_11210 | CLOTH_08830 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Gamma-glutamylputrescine oxidoreductase. | 0.680 |
| adhE | rebO | CLOTH_11210 | CLOTH_14470 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Flavin-dependent L-tryptophan oxidase RebO precursor. | 0.890 |
| dnaN | OPJ55913.1 | CLOTH_15210 | CLOTH_10910 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; SNF2 family N-terminal domain. | 0.941 |
| dnaN | OPJ56036.1 | CLOTH_15210 | CLOTH_12140 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Blue-light-activated protein. | 0.678 |
| dnaN | OPJ56189.1 | CLOTH_15210 | CLOTH_05930 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; SNF2 family N-terminal domain. | 0.941 |
| dnaN | glnK | CLOTH_15210 | CLOTH_07780 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Sensor histidine kinase GlnK. | 0.460 |
| dnaN | kinA | CLOTH_15210 | CLOTH_17360 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Sporulation kinase A. | 0.460 |
| dnaN | rebO | CLOTH_15210 | CLOTH_14470 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Flavin-dependent L-tryptophan oxidase RebO precursor. | 0.605 |
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