Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55397.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.750
OPJ56959.1
Hypothetical protein.
    
 
 0.725
OPJ57013.1
Putative amidase domain protein.
 
     0.688
ctpB
Carboxy-terminal processing protease CtpB precursor; Belongs to the peptidase S41A family.
    
 
 0.672
OPJ55257.1
Hypothetical protein.
  
     0.608
OPJ57214.1
Coat F domain protein.
  
     0.605
OPJ57224.1
Hypothetical protein.
  
     0.596
OPJ55511.1
Divergent AAA domain protein.
 
     0.595
ravA
ATPase RavA.
       0.588
OPJ55394.1
Hypothetical protein.
       0.575
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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