Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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OPJ55400.1Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (333 aa)    
Predicted Functional Partners:
OPJ55399.1
Putative ABC transporter ATP-binding protein.
 
 0.986
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
 
 0.983
yusV_2
Putative siderophore transport system ATP-binding protein YusV.
 
 0.944
btuF
Vitamin B12-binding protein precursor.
 
 0.941
yusV_1
Putative siderophore transport system ATP-binding protein YusV.
 
 0.940
yfiY
Putative siderophore-binding lipoprotein YfiY precursor.
 
 0.789
OPJ54972.1
Hypothetical protein.
  
 0.751
OPJ55402.1
Hypothetical protein.
  
    0.732
feuB
Iron-uptake system permease protein FeuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.524
treR
Trehalose operon transcriptional repressor.
       0.522
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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