OPJ55452.1 protein (Clostridium thermoalcaliphilum)

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Score

OPJ55452.1

R3H domain protein. (206 aa)

Predicted Functional Partners:

OPJ55633.1

0.969

misCA

0.950

rnpA

0.924

yidD

0.891

rsmG

0.875

rng

0.787

rpmH

0.716

mnmE_1

0.705

spoIIAA

0.651

mnmG

0.620

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55452.1	OPJ55633.1	CLOTH_15150	CLOTH_13920	R3H domain protein.	Hypothetical protein; Transcription termination/antitermination protein NusA; Belongs to the UPF0109 family.	0.969
OPJ55452.1	misCA	CLOTH_15150	CLOTH_15160	R3H domain protein.	Membrane protein insertase MisCA precursor.	0.950
OPJ55452.1	mnmE_1	CLOTH_15150	CLOTH_15140	R3H domain protein.	tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.705
OPJ55452.1	mnmG	CLOTH_15150	CLOTH_15130	R3H domain protein.	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	0.620
OPJ55452.1	rng	CLOTH_15150	CLOTH_13100	R3H domain protein.	Ribonuclease G.	0.787
OPJ55452.1	rnpA	CLOTH_15150	CLOTH_15180	R3H domain protein.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.924
OPJ55452.1	rpmH	CLOTH_15150	CLOTH_15190	R3H domain protein.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.716
OPJ55452.1	rsmG	CLOTH_15150	CLOTH_15120	R3H domain protein.	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.875
OPJ55452.1	spoIIAA	CLOTH_15150	CLOTH_00010	R3H domain protein.	Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.	0.651
OPJ55452.1	yidD	CLOTH_15150	CLOTH_15170	R3H domain protein.	Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.891
OPJ55633.1	OPJ55452.1	CLOTH_13920	CLOTH_15150	Hypothetical protein; Transcription termination/antitermination protein NusA; Belongs to the UPF0109 family.	R3H domain protein.	0.969
OPJ55633.1	rng	CLOTH_13920	CLOTH_13100	Hypothetical protein; Transcription termination/antitermination protein NusA; Belongs to the UPF0109 family.	Ribonuclease G.	0.769
misCA	OPJ55452.1	CLOTH_15160	CLOTH_15150	Membrane protein insertase MisCA precursor.	R3H domain protein.	0.950
misCA	mnmE_1	CLOTH_15160	CLOTH_15140	Membrane protein insertase MisCA precursor.	tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.754
misCA	mnmG	CLOTH_15160	CLOTH_15130	Membrane protein insertase MisCA precursor.	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	0.754
misCA	rnpA	CLOTH_15160	CLOTH_15180	Membrane protein insertase MisCA precursor.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.951
misCA	rpmH	CLOTH_15160	CLOTH_15190	Membrane protein insertase MisCA precursor.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.910
misCA	rsmG	CLOTH_15160	CLOTH_15120	Membrane protein insertase MisCA precursor.	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.762
misCA	yidD	CLOTH_15160	CLOTH_15170	Membrane protein insertase MisCA precursor.	Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.905
mnmE_1	OPJ55452.1	CLOTH_15140	CLOTH_15150	tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	R3H domain protein.	0.705