OPJ55463.1 protein (Clostridium thermoalcaliphilum)

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Score

OPJ55463.1

YtxH-like protein. (88 aa)

Predicted Functional Partners:

rsbW

0.835

rsbV

0.813

sigB

0.778

OPJ55464.1

0.773

gyrA

0.553

gyrB

0.456

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55463.1	OPJ55464.1	CLOTH_15260	CLOTH_15270	YtxH-like protein.	Hypothetical protein.	0.773
OPJ55463.1	gyrA	CLOTH_15260	CLOTH_15250	YtxH-like protein.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.553
OPJ55463.1	gyrB	CLOTH_15260	CLOTH_15240	YtxH-like protein.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.456
OPJ55463.1	rsbV	CLOTH_15260	CLOTH_15280	YtxH-like protein.	anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.	0.813
OPJ55463.1	rsbW	CLOTH_15260	CLOTH_15290	YtxH-like protein.	Serine-protein kinase RsbW.	0.835
OPJ55463.1	sigB	CLOTH_15260	CLOTH_15300	YtxH-like protein.	RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.	0.778
OPJ55464.1	OPJ55463.1	CLOTH_15270	CLOTH_15260	Hypothetical protein.	YtxH-like protein.	0.773
OPJ55464.1	gyrA	CLOTH_15270	CLOTH_15250	Hypothetical protein.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.538
OPJ55464.1	gyrB	CLOTH_15270	CLOTH_15240	Hypothetical protein.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.446
OPJ55464.1	rsbV	CLOTH_15270	CLOTH_15280	Hypothetical protein.	anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.	0.773
OPJ55464.1	rsbW	CLOTH_15270	CLOTH_15290	Hypothetical protein.	Serine-protein kinase RsbW.	0.773
OPJ55464.1	sigB	CLOTH_15270	CLOTH_15300	Hypothetical protein.	RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.	0.773
gyrA	OPJ55463.1	CLOTH_15250	CLOTH_15260	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	YtxH-like protein.	0.553
gyrA	OPJ55464.1	CLOTH_15250	CLOTH_15270	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Hypothetical protein.	0.538
gyrA	gyrB	CLOTH_15250	CLOTH_15240	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.999
gyrA	rsbV	CLOTH_15250	CLOTH_15280	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.	0.680
gyrA	rsbW	CLOTH_15250	CLOTH_15290	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Serine-protein kinase RsbW.	0.592
gyrA	sigB	CLOTH_15250	CLOTH_15300	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.	0.636
gyrB	OPJ55463.1	CLOTH_15240	CLOTH_15260	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	YtxH-like protein.	0.456
gyrB	OPJ55464.1	CLOTH_15240	CLOTH_15270	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Hypothetical protein.	0.446