STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55248.1Hypothetical protein. (685 aa)    
Predicted Functional Partners:
OPJ55247.1
Colanic acid biosynthesis protein.
 
    0.953
tagA
Putative N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
   
 0.879
OPJ55245.1
Hypothetical protein.
       0.785
OPJ55443.1
Hypothetical protein.
  
     0.754
OPJ56041.1
Hypothetical protein.
  
     0.732
tktA
Transketolase 1.
       0.700
dxs_2
1-deoxy-D-xylulose-5-phosphate synthase.
       0.695
OPJ55249.1
Hypothetical protein.
 
     0.678
OPJ57089.1
Hypothetical protein.
  
     0.658
OPJ56879.1
HlyD family secretion protein.
  
    0.648
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.