STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglFUDP-N-acetyl-alpha-D-glucosamine C6 dehydratase. (610 aa)    
Predicted Functional Partners:
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.988
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
 
 0.947
ywqD
Tyrosine-protein kinase YwqD.
 
 
 0.871
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.856
mnaA
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.831
puuR
HTH-type transcriptional regulator PuuR.
  
 
 0.826
OPJ55316.1
O-antigen ligase.
  
  
 0.812
cap8A
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.766
OPJ55312.1
Polysaccharide biosynthesis protein.
  
  
 0.764
epsD
Putative glycosyltransferase EpsD.
 
  
 0.762
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.