Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55150.1Fluoroquinolones export ATP-binding proteinc. (284 aa)    
Predicted Functional Partners:
OPJ55148.1
Fluoroquinolones export permease proteinc.
 
 
  0.973
OPJ55149.1
Fluoroquinolones export permease proteinc.
 
 
  0.970
ecfA1
Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.919
mtrR
HTH-type transcriptional regulator MtrR.
 
   
 0.695
OPJ56794.1
ABC-2 family transporter protein.
 
 
 0.649
OPJ56795.1
ABC-2 family transporter protein.
 
 
 0.648
malF
Maltose transport system permease protein MalF.
  
 
 0.592
flgG_2
Flagellar basal-body rod protein FlgG.
   
    0.574
atpC
ATP synthase epsilon chain, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.552
nox
NADH oxidase.
  
    0.510
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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