Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ55162.1Indolepyruvate oxidoreductase subunit beta. (191 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 0.998
OPJ55163.1
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 0.993
hndA_1
NADP-reducing hydrogenase subunit HndA.
  
 0.880
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
  
 0.863
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
  
 0.863
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.826
pta_1
Phosphate acetyltransferase.
    
 0.813
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.798
arsD
Arsenical resistance operon trans-acting repressor ArsD.
  
 0.795
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
  
 0.769
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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