STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55168.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
ycf3
Photosystem I assembly protein Ycf3.
 
     0.821
OPJ55167.1
Hypothetical protein.
 
     0.817
OPJ54640.1
Hypothetical protein.
  
     0.768
ftsL_1
Cell division protein FtsL.
  
     0.738
OPJ55169.1
Hypothetical protein.
  
     0.705
OPJ55424.1
Replication initiation and membrane attachment.
  
     0.692
OPJ56335.1
Fimbrial assembly protein PilN.
  
     0.679
OPJ55237.1
Hypothetical protein.
  
     0.676
OPJ55366.1
Hypothetical protein.
  
     0.666
OPJ57286.1
Hypothetical protein.
 
 
 0.649
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.