ktrB protein (Clostridium thermoalcaliphilum)

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Score

ktrB

Ktr system potassium uptake protein B. (448 aa)

Predicted Functional Partners:

ktrA

0.997

OPJ55180.1

0.798

rsmB

0.643

nifJ

0.640

pheT

0.634

pheS

0.515

thiE

0.484

thiD

0.484

tenI

0.478

thiC

0.478

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55180.1	ktrA	CLOTH_16800	CLOTH_16810	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ktr system potassium uptake protein A.	0.857
OPJ55180.1	ktrB	CLOTH_16800	CLOTH_16820	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ktr system potassium uptake protein B.	0.798
OPJ55180.1	pheS	CLOTH_16800	CLOTH_16790	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.	0.530
OPJ55180.1	pheT	CLOTH_16800	CLOTH_16780	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.750
OPJ55180.1	rsmB	CLOTH_16800	CLOTH_01910	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.477
OPJ55180.1	tenI	CLOTH_16800	CLOTH_16850	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Regulatory protein TenI; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).	0.461
OPJ55180.1	thiC	CLOTH_16800	CLOTH_16860	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.	0.461
OPJ55180.1	thiD	CLOTH_16800	CLOTH_16840	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.	0.466
OPJ55180.1	thiE	CLOTH_16800	CLOTH_16830	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.	0.466
ktrA	OPJ55180.1	CLOTH_16810	CLOTH_16800	Ktr system potassium uptake protein A.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.857
ktrA	ktrB	CLOTH_16810	CLOTH_16820	Ktr system potassium uptake protein A.	Ktr system potassium uptake protein B.	0.997
ktrA	nifJ	CLOTH_16810	CLOTH_01250	Ktr system potassium uptake protein A.	Pyruvate-flavodoxin oxidoreductase.	0.565
ktrA	pheS	CLOTH_16810	CLOTH_16790	Ktr system potassium uptake protein A.	phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.	0.535
ktrA	pheT	CLOTH_16810	CLOTH_16780	Ktr system potassium uptake protein A.	phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.642
ktrA	rsmB	CLOTH_16810	CLOTH_01910	Ktr system potassium uptake protein A.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.820
ktrA	tenI	CLOTH_16810	CLOTH_16850	Ktr system potassium uptake protein A.	Regulatory protein TenI; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).	0.558
ktrA	thiC	CLOTH_16810	CLOTH_16860	Ktr system potassium uptake protein A.	Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.	0.461
ktrA	thiD	CLOTH_16810	CLOTH_16840	Ktr system potassium uptake protein A.	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.	0.483
ktrA	thiE	CLOTH_16810	CLOTH_16830	Ktr system potassium uptake protein A.	Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.	0.562
ktrB	OPJ55180.1	CLOTH_16820	CLOTH_16800	Ktr system potassium uptake protein B.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.798