ycfH protein (Clostridium thermoalcaliphilum)

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Score

ycfH

Putative deoxyribonuclease YcfH. (255 aa)

Predicted Functional Partners:

metG

0.979

yocH

0.766

rsmA

0.736

rnmV

0.627

fliE

0.444

yaaH_1

0.439

ssbA_1

0.436

ssbA_2

0.436

guaA

0.403

ychF

0.400

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fliE	ycfH	CLOTH_03650	CLOTH_17310	Flagellar hook-basal body complex protein FliE.	Putative deoxyribonuclease YcfH.	0.444
guaA	metG	CLOTH_11700	CLOTH_17300	GMP synthase; Catalyzes the synthesis of GMP from XMP.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.816
guaA	rsmA	CLOTH_11700	CLOTH_17340	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.673
guaA	ssbA_1	CLOTH_11700	CLOTH_08160	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Single-stranded DNA-binding protein A.	0.427
guaA	ssbA_2	CLOTH_11700	CLOTH_14990	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Single-stranded DNA-binding protein A.	0.427
guaA	yaaH_1	CLOTH_11700	CLOTH_07930	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Spore germination protein YaaH.	0.881
guaA	ycfH	CLOTH_11700	CLOTH_17310	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Putative deoxyribonuclease YcfH.	0.403
guaA	ychF	CLOTH_11700	CLOTH_01260	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.	0.793
metG	guaA	CLOTH_17300	CLOTH_11700	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.816
metG	rnmV	CLOTH_17300	CLOTH_17330	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.603
metG	rsmA	CLOTH_17300	CLOTH_17340	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.809
metG	ssbA_1	CLOTH_17300	CLOTH_08160	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Single-stranded DNA-binding protein A.	0.599
metG	ssbA_2	CLOTH_17300	CLOTH_14990	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Single-stranded DNA-binding protein A.	0.599
metG	yaaH_1	CLOTH_17300	CLOTH_07930	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Spore germination protein YaaH.	0.476
metG	ycfH	CLOTH_17300	CLOTH_17310	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Putative deoxyribonuclease YcfH.	0.979
metG	ychF	CLOTH_17300	CLOTH_01260	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.	0.868
metG	yocH	CLOTH_17300	CLOTH_17320	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Cell wall-binding protein YocH precursor.	0.672
rnmV	metG	CLOTH_17330	CLOTH_17300	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.603
rnmV	rsmA	CLOTH_17330	CLOTH_17340	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.943
rnmV	ycfH	CLOTH_17330	CLOTH_17310	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Putative deoxyribonuclease YcfH.	0.627