yocH protein (Clostridium thermoalcaliphilum)

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Score

yocH

Cell wall-binding protein YocH precursor. (332 aa)

Predicted Functional Partners:

yneA

0.959

rsmA

0.943

rnmV

0.871

ispE

0.804

ycfH

0.788

metG

0.672

OPJ55766.1

0.630

mepM_2

0.613

OPJ55070.1

0.592

OPJ56861.1

0.584

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55070.1	rnmV	CLOTH_17350	CLOTH_17330	Hypothetical protein.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.605
OPJ55070.1	rsmA	CLOTH_17350	CLOTH_17340	Hypothetical protein.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.622
OPJ55070.1	yocH	CLOTH_17350	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.592
OPJ55766.1	yocH	CLOTH_09440	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.630
OPJ56861.1	yocH	CLOTH_01430	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.584
ispE	rnmV	CLOTH_19210	CLOTH_17330	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.644
ispE	rsmA	CLOTH_19210	CLOTH_17340	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.936
ispE	yocH	CLOTH_19210	CLOTH_17320	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Cell wall-binding protein YocH precursor.	0.804
mepM_2	yocH	CLOTH_14800	CLOTH_17320	Murein DD-endopeptidase MepM.	Cell wall-binding protein YocH precursor.	0.613
metG	rnmV	CLOTH_17300	CLOTH_17330	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.607
metG	rsmA	CLOTH_17300	CLOTH_17340	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.822
metG	ycfH	CLOTH_17300	CLOTH_17310	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Putative deoxyribonuclease YcfH.	0.979
metG	yocH	CLOTH_17300	CLOTH_17320	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Cell wall-binding protein YocH precursor.	0.672
rnmV	OPJ55070.1	CLOTH_17330	CLOTH_17350	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Hypothetical protein.	0.605
rnmV	ispE	CLOTH_17330	CLOTH_19210	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	0.644
rnmV	metG	CLOTH_17330	CLOTH_17300	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.607
rnmV	rsmA	CLOTH_17330	CLOTH_17340	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.947
rnmV	ycfH	CLOTH_17330	CLOTH_17310	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Putative deoxyribonuclease YcfH.	0.589
rnmV	yocH	CLOTH_17330	CLOTH_17320	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Cell wall-binding protein YocH precursor.	0.871
rsmA	OPJ55070.1	CLOTH_17340	CLOTH_17350	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Hypothetical protein.	0.622