yocH protein (Clostridium thermoalcaliphilum)

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Score

yocH

Cell wall-binding protein YocH precursor. (332 aa)

Predicted Functional Partners:

yneA

0.946

rsmA

0.918

rnmV

0.884

ycfH

0.766

ispE

0.723

metG

0.672

OPJ55070.1

0.635

OPJ56861.1

0.583

OPJ56862.1

0.578

OPJ56328.1

0.576

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55070.1	rnmV	CLOTH_17350	CLOTH_17330	Hypothetical protein.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.599
OPJ55070.1	rsmA	CLOTH_17350	CLOTH_17340	Hypothetical protein.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.628
OPJ55070.1	yocH	CLOTH_17350	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.635
OPJ56328.1	OPJ56862.1	CLOTH_07320	CLOTH_01440	Hypothetical protein.	Hypothetical protein.	0.883
OPJ56328.1	yocH	CLOTH_07320	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.576
OPJ56861.1	OPJ56862.1	CLOTH_01430	CLOTH_01440	Hypothetical protein.	Hypothetical protein.	0.980
OPJ56861.1	yocH	CLOTH_01430	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.583
OPJ56862.1	OPJ56328.1	CLOTH_01440	CLOTH_07320	Hypothetical protein.	Hypothetical protein.	0.883
OPJ56862.1	OPJ56861.1	CLOTH_01440	CLOTH_01430	Hypothetical protein.	Hypothetical protein.	0.980
OPJ56862.1	yocH	CLOTH_01440	CLOTH_17320	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.578
ispE	rnmV	CLOTH_19210	CLOTH_17330	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.579
ispE	rsmA	CLOTH_19210	CLOTH_17340	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.917
ispE	yocH	CLOTH_19210	CLOTH_17320	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Cell wall-binding protein YocH precursor.	0.723
metG	rnmV	CLOTH_17300	CLOTH_17330	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.603
metG	rsmA	CLOTH_17300	CLOTH_17340	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.809
metG	ycfH	CLOTH_17300	CLOTH_17310	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Putative deoxyribonuclease YcfH.	0.979
metG	yocH	CLOTH_17300	CLOTH_17320	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Cell wall-binding protein YocH precursor.	0.672
rnmV	OPJ55070.1	CLOTH_17330	CLOTH_17350	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Hypothetical protein.	0.599
rnmV	ispE	CLOTH_17330	CLOTH_19210	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	0.579
rnmV	metG	CLOTH_17330	CLOTH_17300	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.603