hup protein (Clostridium thermoalcaliphilum)

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Predicted Interactions

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Score

hup

DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (92 aa)

Predicted Functional Partners:

OPJ55088.1

0.820

OPJ55090.1

0.752

rpsT

0.700

topA

0.685

rpsO

0.682

fliG

0.641

OPJ57091.1

0.641

fliM

0.641

mazG

0.629

polA_1

0.625

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55088.1	OPJ55090.1	CLOTH_17530	CLOTH_17550	Ribosome-associated heat shock protein Hsp15.	Spore cortex protein YabQ.	0.811
OPJ55088.1	hup	CLOTH_17530	CLOTH_17520	Ribosome-associated heat shock protein Hsp15.	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.820
OPJ55088.1	mazG	CLOTH_17530	CLOTH_17510	Ribosome-associated heat shock protein Hsp15.	Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG.	0.728
OPJ55090.1	OPJ55088.1	CLOTH_17550	CLOTH_17530	Spore cortex protein YabQ.	Ribosome-associated heat shock protein Hsp15.	0.811
OPJ55090.1	hup	CLOTH_17550	CLOTH_17520	Spore cortex protein YabQ.	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.752
OPJ55090.1	mazG	CLOTH_17550	CLOTH_17510	Spore cortex protein YabQ.	Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG.	0.486
OPJ57091.1	fliG	CLOTH_03740	CLOTH_03670	Flagellar basal body rod modification protein.	Flagellar motor switch protein FliG.	0.987
OPJ57091.1	fliM	CLOTH_03740	CLOTH_03800	Flagellar basal body rod modification protein.	Flagellar motor switch protein FliM.	0.994
OPJ57091.1	hup	CLOTH_03740	CLOTH_17520	Flagellar basal body rod modification protein.	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.641
OPJ57091.1	topA	CLOTH_03740	CLOTH_05850	Flagellar basal body rod modification protein.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.424
fliG	OPJ57091.1	CLOTH_03670	CLOTH_03740	Flagellar motor switch protein FliG.	Flagellar basal body rod modification protein.	0.987
fliG	fliM	CLOTH_03670	CLOTH_03800	Flagellar motor switch protein FliG.	Flagellar motor switch protein FliM.	0.999
fliG	hup	CLOTH_03670	CLOTH_17520	Flagellar motor switch protein FliG.	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.641
fliG	rpsO	CLOTH_03670	CLOTH_04220	Flagellar motor switch protein FliG.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.677
fliG	topA	CLOTH_03670	CLOTH_05850	Flagellar motor switch protein FliG.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.428
fliM	OPJ57091.1	CLOTH_03800	CLOTH_03740	Flagellar motor switch protein FliM.	Flagellar basal body rod modification protein.	0.994
fliM	fliG	CLOTH_03800	CLOTH_03670	Flagellar motor switch protein FliM.	Flagellar motor switch protein FliG.	0.999
fliM	hup	CLOTH_03800	CLOTH_17520	Flagellar motor switch protein FliM.	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.641
hup	OPJ55088.1	CLOTH_17520	CLOTH_17530	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Ribosome-associated heat shock protein Hsp15.	0.820
hup	OPJ55090.1	CLOTH_17520	CLOTH_17550	DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Spore cortex protein YabQ.	0.752

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