Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55003.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
OPJ55002.1
PD-(D/E)XK nuclease superfamily protein.
 
     0.962
OPJ55001.1
Hypothetical protein.
 
     0.961
polA_2
DNA polymerase I, thermostable.
 
     0.927
OPJ55006.1
Hypothetical protein.
 
     0.868
OPJ55007.1
Hypothetical protein.
 
     0.848
OPJ56188.1
VRR-NUC domain protein.
 
     0.843
OPJ56189.1
Hypothetical protein; SNF2 family N-terminal domain.
 
     0.786
OPJ56187.1
Virulence-associated protein E.
 
     0.729
OPJ55005.1
Phage antirepressor protein KilAC domain protein.
 
     0.688
OPJ55000.1
Hypothetical protein.
 
     0.624
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.