Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OPJ54932.1MazG nucleotide pyrophosphohydrolase domain protein. (131 aa)    
Predicted Functional Partners:
carD
RNA polymerase-binding transcription factor CarD.
  
    0.657
OPJ55792.1
Hypothetical protein.
  
    0.603
OPJ54930.1
Putative PIN and TRAM-domain containing protein precursor.
       0.597
OPJ56049.1
Flagellar protein FlaG.
  
     0.533
OPJ57076.1
Hypothetical protein.
  
     0.491
OPJ57283.1
Hypothetical protein; Belongs to the UPF0473 family.
  
    0.490
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
       0.475
OPJ55249.1
Hypothetical protein.
  
     0.473
OPJ56267.1
Late competence development protein ComFB.
  
     0.470
ycgR
Flagellar brake protein YcgR.
  
     0.447
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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