Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
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Co-expression
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[Homology]
Score
gloA_2Lactoylglutathione lyase. (134 aa)    
Predicted Functional Partners:
scpA_3
methylmalonyl-CoA mutase.
  
 0.998
OPJ54823.1
methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 
 0.991
scpA_2
methylmalonyl-CoA mutase.
 
  
 0.984
argK
Putative GTPase ArgK.
  
  0.980
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 0.960
gcdC
glutaconyl-CoA decarboxylase subunit gamma.
 
 
 0.894
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.821
accB
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.785
oadG
Oxaloacetate decarboxylase gamma chain.
  
  
 0.762
gcdB
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
     0.677
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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