OPJ54739.1 protein (Clostridium thermoalcaliphilum)

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Score

OPJ54739.1

Type III restriction enzyme, res subunit. (742 aa)

Predicted Functional Partners:

polA_1

0.951

rpoA

0.946

rpoB

0.945

rpoZ

0.930

OPJ56057.1

0.798

rpoC

0.796

dnaN

0.773

OPJ54738.1

0.773

OPJ55909.1

0.758

hsdR

0.589

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ54738.1	OPJ54739.1	CLOTH_19590	CLOTH_19600	Hypothetical protein.	Type III restriction enzyme, res subunit.	0.773
OPJ54739.1	OPJ54738.1	CLOTH_19600	CLOTH_19590	Type III restriction enzyme, res subunit.	Hypothetical protein.	0.773
OPJ54739.1	OPJ55909.1	CLOTH_19600	CLOTH_10870	Type III restriction enzyme, res subunit.	DNA polymerase II.	0.758
OPJ54739.1	OPJ56057.1	CLOTH_19600	CLOTH_12350	Type III restriction enzyme, res subunit.	Hypothetical protein.	0.798
OPJ54739.1	dnaN	CLOTH_19600	CLOTH_15210	Type III restriction enzyme, res subunit.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.773
OPJ54739.1	hsdR	CLOTH_19600	CLOTH_19720	Type III restriction enzyme, res subunit.	Type I restriction enzyme; Subunit R is required for both nuclease and ATPase activities, but not for modification.	0.589
OPJ54739.1	polA_1	CLOTH_19600	CLOTH_12690	Type III restriction enzyme, res subunit.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.951
OPJ54739.1	rpoA	CLOTH_19600	CLOTH_18300	Type III restriction enzyme, res subunit.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.946
OPJ54739.1	rpoB	CLOTH_19600	CLOTH_18670	Type III restriction enzyme, res subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.945
OPJ54739.1	rpoC	CLOTH_19600	CLOTH_18660	Type III restriction enzyme, res subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.796
OPJ54739.1	rpoZ	CLOTH_19600	CLOTH_01840	Type III restriction enzyme, res subunit.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.930
OPJ55909.1	OPJ54739.1	CLOTH_10870	CLOTH_19600	DNA polymerase II.	Type III restriction enzyme, res subunit.	0.758
OPJ55909.1	dnaN	CLOTH_10870	CLOTH_15210	DNA polymerase II.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.976
OPJ55909.1	polA_1	CLOTH_10870	CLOTH_12690	DNA polymerase II.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.970
OPJ56057.1	OPJ54739.1	CLOTH_12350	CLOTH_19600	Hypothetical protein.	Type III restriction enzyme, res subunit.	0.798
OPJ56057.1	rpoA	CLOTH_12350	CLOTH_18300	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.778
OPJ56057.1	rpoB	CLOTH_12350	CLOTH_18670	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.748
OPJ56057.1	rpoZ	CLOTH_12350	CLOTH_01840	Hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.754
dnaN	OPJ54739.1	CLOTH_15210	CLOTH_19600	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Type III restriction enzyme, res subunit.	0.773
dnaN	OPJ55909.1	CLOTH_15210	CLOTH_10870	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase II.	0.976