| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ54709.1 | OPJ56764.1 | CLOTH_19990 | CLOTH_00460 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Preprotein translocase subunit YajC. | 0.669 |
| OPJ54709.1 | dnaX_1 | CLOTH_19990 | CLOTH_17060 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III subunit tau. | 0.626 |
| OPJ54709.1 | dnaX_2 | CLOTH_19990 | CLOTH_20000 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.890 |
| OPJ54709.1 | fliR | CLOTH_19990 | CLOTH_03860 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.519 |
| OPJ54709.1 | ftsY | CLOTH_19990 | CLOTH_13880 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.499 |
| OPJ54709.1 | pncC | CLOTH_19990 | CLOTH_01150 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.571 |
| OPJ54709.1 | recR | CLOTH_19990 | CLOTH_19980 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.990 |
| OPJ54709.1 | rimP | CLOTH_19990 | CLOTH_04130 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.608 |
| OPJ54709.1 | rplM | CLOTH_19990 | CLOTH_18240 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.549 |
| OPJ54709.1 | secY | CLOTH_19990 | CLOTH_18390 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.501 |
| OPJ56764.1 | OPJ54709.1 | CLOTH_00460 | CLOTH_19990 | Preprotein translocase subunit YajC. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.669 |
| OPJ56764.1 | ftsY | CLOTH_00460 | CLOTH_13880 | Preprotein translocase subunit YajC. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.929 |
| OPJ56764.1 | rimP | CLOTH_00460 | CLOTH_04130 | Preprotein translocase subunit YajC. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.540 |
| OPJ56764.1 | rplM | CLOTH_00460 | CLOTH_18240 | Preprotein translocase subunit YajC. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.612 |
| OPJ56764.1 | secY | CLOTH_00460 | CLOTH_18390 | Preprotein translocase subunit YajC. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.940 |
| dnaX_1 | OPJ54709.1 | CLOTH_17060 | CLOTH_19990 | DNA polymerase III subunit tau. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.626 |
| dnaX_1 | dnaX_2 | CLOTH_17060 | CLOTH_20000 | DNA polymerase III subunit tau. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.939 |
| dnaX_1 | pncC | CLOTH_17060 | CLOTH_01150 | DNA polymerase III subunit tau. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.441 |
| dnaX_2 | OPJ54709.1 | CLOTH_20000 | CLOTH_19990 | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.890 |
| dnaX_2 | dnaX_1 | CLOTH_20000 | CLOTH_17060 | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III subunit tau. | 0.939 |
