| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ54709.1 | OPJ56764.1 | CLOTH_19990 | CLOTH_00460 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Preprotein translocase subunit YajC. | 0.643 |
| OPJ54709.1 | dnaX_1 | CLOTH_19990 | CLOTH_17060 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III subunit tau. | 0.559 |
| OPJ54709.1 | dnaX_2 | CLOTH_19990 | CLOTH_20000 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.856 |
| OPJ54709.1 | ffh | CLOTH_19990 | CLOTH_13900 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.497 |
| OPJ54709.1 | fliR | CLOTH_19990 | CLOTH_03860 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.641 |
| OPJ54709.1 | ftsY | CLOTH_19990 | CLOTH_13880 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.497 |
| OPJ54709.1 | pncC | CLOTH_19990 | CLOTH_01150 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.538 |
| OPJ54709.1 | recR | CLOTH_19990 | CLOTH_19980 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.991 |
| OPJ54709.1 | rimP | CLOTH_19990 | CLOTH_04130 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.586 |
| OPJ54709.1 | secY | CLOTH_19990 | CLOTH_18390 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.494 |
| OPJ56764.1 | OPJ54709.1 | CLOTH_00460 | CLOTH_19990 | Preprotein translocase subunit YajC. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.643 |
| OPJ56764.1 | ffh | CLOTH_00460 | CLOTH_13900 | Preprotein translocase subunit YajC. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.931 |
| OPJ56764.1 | ftsY | CLOTH_00460 | CLOTH_13880 | Preprotein translocase subunit YajC. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.933 |
| OPJ56764.1 | rimP | CLOTH_00460 | CLOTH_04130 | Preprotein translocase subunit YajC. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.487 |
| OPJ56764.1 | secY | CLOTH_00460 | CLOTH_18390 | Preprotein translocase subunit YajC. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.947 |
| dnaX_1 | OPJ54709.1 | CLOTH_17060 | CLOTH_19990 | DNA polymerase III subunit tau. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.559 |
| dnaX_1 | dnaX_2 | CLOTH_17060 | CLOTH_20000 | DNA polymerase III subunit tau. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.948 |
| dnaX_1 | pncC | CLOTH_17060 | CLOTH_01150 | DNA polymerase III subunit tau. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.515 |
| dnaX_1 | recR | CLOTH_17060 | CLOTH_19980 | DNA polymerase III subunit tau. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.554 |
| dnaX_2 | OPJ54709.1 | CLOTH_20000 | CLOTH_19990 | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.856 |
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