STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk2_2Butyrate kinase 2; Belongs to the acetokinase family. (357 aa)    
Predicted Functional Partners:
pta_2
Phosphate acetyltransferase.
 
 0.998
pta_1
Phosphate acetyltransferase.
 
 0.990
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
     
 0.895
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
     
 0.853
buk2_1
Butyrate kinase 2; Belongs to the acetokinase family.
 
  
 
0.824
OPJ54685.1
Hypothetical protein.
       0.795
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.687
ndhI_4
NAD(P)H-quinone oxidoreductase subunit I.
       0.603
porC_2
Pyruvate synthase subunit PorC.
     
 0.547
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
     
 0.531
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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