Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IO98_00860Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (898 aa)    
Predicted Functional Partners:
IO98_05120
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
IO98_03380
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
IO98_05150
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.988
IO98_15200
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.988
IO98_00855
NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
IO98_00850
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
IO98_05105
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.966
IO98_05125
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.963
IO98_18465
gltD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.961
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.946
Your Current Organism:
Clostridium celerecrescens
NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.