Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
IO98_03065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
IO98_03060
Flagellar motor protein MotA; With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
IO98_14735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
IO98_19155
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
IO98_16390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
flgC
With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
IO98_19105
Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
IO98_19220
Flagellar hook-basal body protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.938
IO98_19180
Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
IO98_19100
Flagellar M-ring protein FliF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
IO98_19345
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
Your Current Organism:
Clostridium celerecrescens
NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A
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