Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IO98_04785Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1806 aa)    
Predicted Functional Partners:
IO98_18195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.951
IO98_20715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.898
IO98_06775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.797
IO98_04780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
IO98_05775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
IO98_06930
Cell wall-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
IO98_15335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
IO98_16435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
IO98_18730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
IO98_21635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
Your Current Organism:
Clostridium celerecrescens
NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.