STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IO98_09005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)    
Predicted Functional Partners:
IO98_09010
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
IO98_09015
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
IO98_08995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.666
IO98_14530
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.648
IO98_09000
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
IO98_06570
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
IO98_09805
Accessory gene regulator AgrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
IO98_05520
Biotin attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.432
IO98_14540
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.432
IO98_05515
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
  
 
  0.405
Your Current Organism:
Clostridium celerecrescens
NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.