Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IO98_18655L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (104 aa)    
Predicted Functional Partners:
rhaA
Sugar isomerase; Catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
IO98_18660
Rhamnulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
  
 0.882
IO98_20675
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.654
IO98_17360
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.606
IO98_03590
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.490
IO98_18665
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
IO98_17565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.414
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.404
Your Current Organism:
Clostridium celerecrescens
NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A
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