IO98_19010 protein (Clostridium celerecrescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

IO98_19010

Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)

Predicted Functional Partners:

IO98_19015

0.999

IO98_19020

0.990

IO98_15480

0.969

IO98_15470

0.955

IO98_17330

0.778

IO98_07735

0.777

IO98_10040

0.759

IO98_12860

0.753

IO98_06430

0.748

IO98_18320

0.746

Your Current Organism:

Clostridium celerecrescens

NCBI taxonomy Id: 29354
Other names: ATCC 49205, CECT 954, Clostridium celericrescens, DSM 5628, [. celerecrescens, [Clostridium] celerecrescens, strain 18A

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

page 1 of 3

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
IO98_06430	IO98_15470	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_06430	IO98_19010	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
IO98_06430	IO98_19020	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_07735	IO98_19010	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
IO98_10040	IO98_15470	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_10040	IO98_19010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
IO98_10040	IO98_19020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_12860	IO98_15470	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_12860	IO98_19010	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
IO98_12860	IO98_19020	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_06430	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_10040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_12860	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_15480	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
IO98_15470	IO98_17330	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_18320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
IO98_15470	IO98_19010	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
IO98_15470	IO98_19015	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
IO98_15480	IO98_15470	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
IO98_15480	IO98_19010	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969