STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES73164.1Subtilase family protein; Belongs to the peptidase S8 family. (589 aa)    
Predicted Functional Partners:
SET37363.1
Putative peptidoglycan binding domain-containing protein.
  
 0.880
SET29390.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
  
  
  0.786
SET63399.1
LysM domain-containing protein.
  
  
  0.770
SES87430.1
Stage III sporulation protein AH.
  
     0.723
SES83695.1
Stage II sporulation protein P.
  
     0.706
SET47941.1
Hypothetical protein.
  
     0.701
SET63492.1
Spore coat protein, CotS family.
  
     0.683
SES87251.1
Stage III sporulation protein AE.
  
     0.674
SES70424.1
Serine protease AprX; Belongs to the peptidase S8 family.
  
 
0.656
SET63445.1
PrcB C-terminal.
  
     0.651
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.