STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES86585.1Iron-regulated ABC transporter ATPase subunit SufC. (241 aa)    
Predicted Functional Partners:
SES86602.1
Hypothetical protein.
 
 
 0.999
SES86676.1
Nitrogen fixation protein NifU.
  
  
 0.892
SET22301.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.809
SES86564.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
       0.454
SET15661.1
Thioredoxin reductase (NADPH).
 
  
 0.440
SET46923.1
Thioredoxin reductase (NADPH).
 
  
 0.427
SES78743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.405
SET06007.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
     
 0.404
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.