STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET10693.1Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains. (528 aa)    
Predicted Functional Partners:
SES90320.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.828
SET52333.1
AraC-type DNA-binding protein.
  
  
  0.797
SES62912.1
Flagellar motor switch protein FliN/FliY.
  
 0.765
SET55098.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.758
SES63123.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.743
SET05218.1
Two-component system, chemotaxis family, response regulator CheV.
  
 0.722
SES62903.1
Flagellar motor switch protein FliM.
  
 0.711
SET62494.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.691
SET22488.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.690
SES82855.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.665
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.