STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET11471.1Glycosyl hydrolase family 9. (237 aa)    
Predicted Functional Partners:
SET32331.1
Cellulose binding domain-containing protein.
 
 0.938
SET30856.1
Pectate lyase.
  
  
 0.912
SET05926.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
 0.877
SET03212.1
Lysophospholipase L1.
 
 0.876
SET65764.1
Endoglucanase Cel9M.
  
  0.873
SET25143.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
 
 0.825
SES90909.1
Beta-glucanase, GH16 family.
 
  
 0.810
SET41109.1
Endo-1,3(4)-beta-glucanase.
 
  0.806
SET65748.1
Endo-1,4-beta-xylanase, GH35 family.
 
 
 0.805
SES79236.1
Beta-glucanase, GH16 family.
 
  
 0.788
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.