STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET09589.1TATA-box binding. (252 aa)    
Predicted Functional Partners:
SET41604.1
Stage II sporulation protein E.
  
     0.701
SET44532.1
Hypothetical protein.
  
     0.688
SET28845.1
Hypothetical protein.
  
    0.647
SET63399.1
LysM domain-containing protein.
  
     0.638
SES71588.1
Hypothetical protein.
  
     0.613
SET47941.1
Hypothetical protein.
  
     0.603
atpC-2
ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.602
atpD-2
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.578
SES87019.1
Stage III sporulation protein AC.
  
     0.566
SES79633.1
Single-strand binding protein family protein.
  
     0.561
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.