STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET14240.1Aspartate aminotransferase. (394 aa)    
Predicted Functional Partners:
SES78743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.947
SET19877.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.921
SET14252.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
  0.807
SET55973.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.776
SET21982.1
2,4-dienoyl-CoA reductase.
  
 0.744
SET50479.1
Chorismate mutase.
 
 
 0.740
SES92613.1
Amino acid adenylation domain-containing protein.
  
 
 0.733
SET26191.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.706
SET63729.1
Aspartate aminotransferase.
  
  
 
0.702
SET26150.1
Homocysteine S-methyltransferase.
  
 
 0.692
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.