STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET14519.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
SET14494.1
Hypothetical protein.
       0.773
SET14480.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
       0.661
metK-2
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.616
SET14358.1
ATP-binding cassette, subfamily B, MsbA.
       0.616
SET14372.1
ATP-binding cassette, subfamily B.
       0.616
SET14532.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
       0.529
SET14554.1
Transcriptional antiterminator NusG.
       0.473
SET14266.1
S-formylglutathione hydrolase FrmB.
       0.434
SET14569.1
Hypothetical protein.
       0.400
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.