STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET20057.1Condensation domain-containing protein. (407 aa)    
Predicted Functional Partners:
SET49269.1
Acyl transferase domain-containing protein.
  
 
 0.952
SES92628.1
Acyl transferase domain-containing protein.
  
 
 0.944
SES92613.1
Amino acid adenylation domain-containing protein.
  
 
 0.940
SET40022.1
Phosphopantetheine attachment site.
  
 
 0.929
SES92583.1
Phosphopantetheine attachment site.
  
 
 0.921
SET42771.1
Pyochelin synthetase.
  
 
 0.910
SET19996.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
       0.773
SES73464.1
Acyl transferase domain-containing protein.
  
 
 0.741
SET49288.1
Thioester reductase domain-containing protein.
  
 
 0.741
SES92591.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.706
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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