STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET22805.1Pectin lyase. (709 aa)    
Predicted Functional Partners:
SET05389.1
Endo-1,4-beta-xylanase.
  
   
 0.883
SET30856.1
Pectate lyase.
  
 0.864
SET05926.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
 
 0.809
SES85948.1
Glycosyl hydrolases family 39.
  
  
  0.787
SET65748.1
Endo-1,4-beta-xylanase, GH35 family.
 
  
 0.782
SET19730.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase.
  
     0.759
SET41130.1
Cellulose 1,4-beta-cellobiosidase.
  
  
 0.754
SES72923.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.747
SES92419.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.744
SET07795.1
Arabinan endo-1,5-alpha-L-arabinosidase.
   
 0.725
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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