STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET23031.1Flavorubredoxin. (388 aa)    
Predicted Functional Partners:
SET06007.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.971
SES92851.1
Carbon-monoxide dehydrogenase catalytic subunit.
 
 
 0.937
SES78743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.927
SET19877.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.910
SES70826.1
Glutamine synthetase.
    
 0.848
SET21982.1
2,4-dienoyl-CoA reductase.
    
 0.828
SET03657.1
Uroporphyrinogen III methyltransferase / synthase.
  
  
 0.806
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
 
 0.763
SET58975.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.761
SET23503.1
Carbon-nitrogen hydrolase.
    
  0.735
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.