STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET27979.1Predicted arabinose efflux permease, MFS family. (403 aa)    
Predicted Functional Partners:
SES92613.1
Amino acid adenylation domain-containing protein.
  
 
 0.898
SET49269.1
Acyl transferase domain-containing protein.
  
 
 0.888
SES92628.1
Acyl transferase domain-containing protein.
  
 
 0.860
SET42771.1
Pyochelin synthetase.
  
 
 0.856
SET27965.1
CDP-diacylglycerol---serine O-phosphatidyltransferase.
  
 
  0.839
SET40022.1
Phosphopantetheine attachment site.
  
 
 0.807
SET50479.1
Chorismate mutase.
  
 
 0.806
SES77809.1
Hypothetical protein.
 
 
 0.740
SET26135.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
  0.705
SET27947.1
Putative integral membrane protein DUF46.
       0.697
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
Server load: low (26%) [HD]