STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET28275.1DNA adenine methylase. (282 aa)    
Predicted Functional Partners:
SET28289.1
Hypothetical protein.
 
     0.950
SES64909.1
DNA adenine methylase.
  
     0.696
SES61988.1
DNA adenine methylase.
  
  
  0.667
SES68937.1
Phage terminase small subunit.
  
    0.627
SET28314.1
cob(I)alamin adenosyltransferase.
       0.603
SET28337.1
Hypothetical protein.
       0.603
SET20569.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.598
SET20531.1
Helix-turn-helix.
 
  
 0.460
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
 
    0.445
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.