STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET30573.1ABC-type multidrug transport system, ATPase component. (290 aa)    
Predicted Functional Partners:
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.922
SES77544.1
ABC-2 type transport system ATP-binding protein.
 
    
0.921
SES77348.1
Putative ABC transport system ATP-binding protein.
 
 
 
0.914
SET22094.1
ABC-2 type transport system ATP-binding protein.
 
    
0.906
SES64149.1
ABC-2 type transport system ATP-binding protein.
 
    
0.905
SET04849.1
ABC-2 type transport system ATP-binding protein.
 
    
0.899
SES92467.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.859
SET30556.1
Hypothetical protein.
       0.748
SET63644.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
   
 
0.748
SET30587.1
Hypothetical protein.
       0.741
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.