STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET33132.1ATPase family associated with various cellular activities (AAA). (500 aa)    
Predicted Functional Partners:
SET33109.1
Predicted metal-dependent peptidase.
    0.986
SET33083.1
Leucine rich repeat-containing protein.
 
     0.957
SET33170.1
Permease of the drug/metabolite transporter (DMT) superfamily.
 
     0.689
SET33148.1
Hypothetical protein.
       0.648
SES76739.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
    0.520
SET24863.1
Arginine decarboxylase.
   
 
 0.506
SET59953.1
Arginine/lysine/ornithine decarboxylase.
   
 
 0.506
SET48142.1
Manganese-dependent inorganic pyrophosphatase.
 
     0.459
SET33058.1
Alcohol dehydrogenase, class IV.
       0.439
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.