STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET34753.1Phospholipase_D-nuclease N-terminal. (63 aa)    
Predicted Functional Partners:
SET34695.1
ABC-2 type transport system permease protein.
 
    0.981
SET34745.1
ABC-2 type transport system ATP-binding protein.
 
    0.950
SET26570.1
Hypothetical protein.
  
  
 0.824
SET34683.1
L-amino acid N-acyltransferase YncA.
       0.737
SET34772.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
       0.723
SET34782.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
       0.649
SES85738.1
Hypothetical protein.
  
     0.526
SET34668.1
Hypothetical protein.
       0.520
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.