STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET35831.1GBS Bsp-like repeat-containing protein. (926 aa)    
Predicted Functional Partners:
SET24908.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.635
SET33449.1
Stage II sporulation protein.
  
 
 0.589
SES90705.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family.
 
  
 0.544
SET35845.1
Fructose-bisphosphate aldolase, class II.
       0.513
SET00773.1
Hypothetical protein.
  
   0.501
SET28999.1
Membrane associated serine protease, rhomboid family.
  
   0.501
SES64642.1
Penicillin-binding protein 1A.
    
 0.483
SET60277.1
Penicillin-binding protein, 1A family.
    
 0.483
SES90759.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
   
 
 0.473
SES91524.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
   
 
 0.473
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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