STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET37619.1Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)    
Predicted Functional Partners:
SES92613.1
Amino acid adenylation domain-containing protein.
  
 
 0.955
SET40022.1
Phosphopantetheine attachment site.
  
 
 0.954
SET49269.1
Acyl transferase domain-containing protein.
  
 
 0.951
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.939
SET42771.1
Pyochelin synthetase.
  
 
 0.876
SES92628.1
Acyl transferase domain-containing protein.
  
 
 0.837
SES92583.1
Phosphopantetheine attachment site.
  
 
 0.765
SES78743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.756
SET37635.1
Putative peptide zinc metalloprotease protein.
       0.746
SET19877.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.741
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.