STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET37703.1Radical SAM superfamily enzyme YgiQ, UPF0313 family. (438 aa)    
Predicted Functional Partners:
SET37734.1
UDP:flavonoid glycosyltransferase YjiC, YdhE family.
  
    0.790
SES92523.1
B12 binding domain-containing protein.
  
     0.773
SET37721.1
Hypothetical protein.
       0.773
SET37755.1
Nucleotidyl transferase.
       0.727
SET37674.1
ABC-2 type transport system permease protein.
       0.709
SET37687.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.709
SET34772.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
  
     0.683
SET37654.1
ABC-2 type transport system ATP-binding protein.
       0.631
SES64092.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
  
    0.589
SET34654.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
    0.547
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.