STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET44223.1Leucine rich repeat-containing protein. (555 aa)    
Predicted Functional Partners:
SES84794.1
Leucine rich repeat-containing protein.
  
  
  0.805
SET05926.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
  0.788
SET32331.1
Cellulose binding domain-containing protein.
    
  0.788
SET33083.1
Leucine rich repeat-containing protein.
  
   0.730
SES90641.1
Hypothetical protein.
  
     0.619
SES93404.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.617
SET30856.1
Pectate lyase.
     
 0.593
SET03212.1
Lysophospholipase L1.
   
  0.591
SET65764.1
Endoglucanase Cel9M.
    
   0.589
SET00233.1
Sialate O-acetylesterase.
  
 
  0.573
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.