STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET46971.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
SES78743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.722
SET19877.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.717
SET26191.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.696
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.693
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.690
SET50516.1
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.669
SET26135.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.572
SET46977.1
Hypothetical protein.
       0.563
SET47001.1
Hypothetical protein.
       0.548
SET46952.1
Flavodoxin.
  
    0.518
Your Current Organism:
Clostridium polysaccharolyticum
NCBI taxonomy Id: 29364
Other names: ATCC 33142, Fusobacterium polysaccharolyticum, [. polysaccharolyticum, [Clostridium] polysaccharolyticum, strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.