Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yutFPutative hydrolase YutF; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. (266 aa)    
Predicted Functional Partners:
purH
Bifunctional purine biosynthesis protein PurH.
   
  0.870
cmk_1
Cytidylate kinase.
  
 
  0.855
OOM75046.1
Cobalt-dependent inorganic pyrophosphatase.
    
  0.852
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.842
egsA
Glycerol-1-phosphate dehydrogenase.
  
 
 0.830
yfkN
Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family.
  
 
 0.827
udk_2
Uridine kinase.
  
 
 0.815
cinA_1
Putative competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.813
gmr_4
Cyclic di-GMP phosphodiesterase Gmr.
    
  0.808
guaB_1
Inosine-5'-monophosphate dehydrogenase.
    
  0.794
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.