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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM82508.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
OOM81791.1
Phage tail sheath protein.
 
 
 0.952
OOM71106.1
Phage tail sheath protein.
 
 
 0.952
OOM71098.1
Hypothetical protein.
 
 
 0.947
OOM81798.1
Hypothetical protein.
 
 
 0.945
OOM72919.1
Phage tail sheath protein.
 
 
 0.937
OOM72927.1
Hypothetical protein.
 
 
 0.930
OOM82337.1
Hypothetical protein.
 
 
 0.876
OOM82329.1
Phage tail sheath protein.
 
 
 0.846
OOM71102.1
Hypothetical protein.
 
  
 0.810
OOM72928.1
Baseplate J-like protein.
 
    0.804
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.