Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OOM82352.1GDSL-like lipase/acylhydrolase. (296 aa)    
Predicted Functional Partners:
OOM82353.1
Hypothetical protein.
     0.961
OOM82355.1
Hypothetical protein.
 
  
  0.932
patA_1
Peptidoglycan O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
 
  
  0.878
OOM79587.1
Endoglucanase E1 precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.840
OOM76284.1
Hypothetical protein.
    
 0.635
patA_7
Peptidoglycan O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
 
  
  0.612
OOM82356.1
Hypothetical protein.
       0.551
OOM71088.1
Phage tail protein.
  
   0.549
OOM71087.1
Prophage endopeptidase tail.
   
 
 0.535
celK
Cellulose 1,4-beta-cellobiosidase precursor; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.531
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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