STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloALactoylglutathione lyase. (126 aa)    
Predicted Functional Partners:
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.929
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.929
OOM75802.1
Putative metallo-hydrolase.
 
 0.860
yvgN
Glyoxal reductase.
  
 0.848
gloB_2
Hydroxyacylglutathione hydrolase.
  
 0.839
ghrB
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.822
OOM75046.1
Cobalt-dependent inorganic pyrophosphatase.
    
 0.809
OOM70454.1
Metallo-beta-lactamase L1 precursor.
  
 0.803
OOM81855.1
Ferredoxin.
  
 
 0.797
tdcB
L-threonine dehydratase catabolic TdcB.
   
 
 0.797
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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